STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46932.1PFAM: polysaccharide biosynthesis protein CapD; KEGG: fra:Francci3_3473 polysaccharide biosynthesis protein CapD. (615 aa)    
Predicted Functional Partners:
ADL45668.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: nml:Namu_5255 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.900
ADL46931.1
TIGRFAM: capsular exopolysaccharide family; KEGG: nml:Namu_4449 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.898
ADL46157.1
Glutamine--scyllo-inositol transaminase; KEGG: fra:Francci3_3363 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.848
ADL45630.1
KEGG: stp:Strop_1688 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.845
ADL45988.1
Glutamine--scyllo-inositol transaminase; KEGG: fal:FRAAL0914 3-amino-5-hydroxybenzoic acid synthase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.833
ADL47511.1
Glutamine--scyllo-inositol transaminase; KEGG: svi:Svir_29860 predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.823
ADL46241.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: sro:Sros_5205 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis-like protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.812
ADL49673.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: lipopolysaccharide biosynthesis protein.
 
  
 0.789
ADL45660.1
PFAM: sugar transferase; KEGG: undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.732
ADL45673.1
Nucleotide sugar dehydrogenase; KEGG: sro:Sros_6488 lipopolysaccharide biosynthesis protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerization; UDP-glucose/GDP-mannose dehydrogenase.
 
  
 0.602
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.