STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46970.1PFAM: Strictosidine synthase, conserved region; KEGG: rop:ROP_06470 hypothetical protein. (339 aa)    
Predicted Functional Partners:
ADL45513.1
PFAM: inner-membrane translocator; KEGG: jan:Jann_0883 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
      0.651
ADL46969.1
KEGG: saq:Sare_2243 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
       0.521
ADL48243.1
KEGG: saq:Sare_3639 saccharopine dehydrogenase (NAD(+), L-glutamate-forming); PFAM: Saccharopine dehydrogenase.
  
     0.516
ADL48297.1
PFAM: inner-membrane translocator; KEGG: sro:Sros_8258 ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
      0.499
ADL44179.1
KEGG: scb:SCAB_26841 putative serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap.
  
 
   0.407
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.