STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46981.1KEGG: stp:Strop_2883 WGR domain-containing protein; PFAM: WGR domain-containing protein; SMART: WGR domain-containing protein. (1227 aa)    
Predicted Functional Partners:
ADL46977.1
KEGG: stp:Strop_2879 hypothetical protein.
 
     0.951
ADL46979.1
KEGG: stp:Strop_2881 hypothetical protein.
 
     0.950
ADL46978.1
KEGG: stp:Strop_2880 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A.
 
     0.946
ADL46980.1
KEGG: stp:Strop_2882 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
     0.940
ADL46976.1
PFAM: DNA primase small subunit; KEGG: saq:Sare_2236 DNA primase small subunit.
       0.664
ADL44825.1
PFAM: ADP-ribosylation/Crystallin J1; KEGG: stp:Strop_4210 ADP-ribosylation/crystallin J1.
  
     0.596
ADL46982.1
PFAM: protein of unknown function DUF214; KEGG: sna:Snas_5641 hypothetical protein.
       0.565
ADL46983.1
KEGG: sna:Snas_5642 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.565
ADL49447.1
KEGG: saq:Sare_0260 hypothetical protein.
  
     0.529
ADL44060.1
KEGG: sro:Sros_7437 hypothetical protein.
  
     0.503
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.