STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47037.1KEGG: ami:Amir_1808 putative amino acid transporter. (698 aa)    
Predicted Functional Partners:
ADL47038.1
KEGG: sro:Sros_3377 hypothetical protein.
       0.615
ADL46829.1
KEGG: scb:SCAB_43101 hypothetical protein.
    
 0.471
ADL47039.1
KEGG: stp:Strop_2512 hypothetical protein.
       0.457
ADL47773.1
TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: sco:SCO2226 bi-functional protein (secreted alpha-amylase/dextrinase); SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
   
 0.443
ADL44331.1
KEGG: stp:Strop_0801 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
    
 0.432
ADL44336.1
Alpha amylase catalytic region; KEGG: sro:Sros_3328 maltodextrin glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
    
 0.432
glgE
Alpha amylase catalytic sub domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
 0.432
ADL46524.1
KEGG: cai:Caci_8467 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
    
 0.432
ADL47225.1
KEGG: saq:Sare_2896 alpha-amylase; PFAM: alpha amylase catalytic region; glycoside hydrolase starch-binding; alpha amylase all-beta; SMART: alpha amylase all-beta.
    
 0.432
ADL48143.1
Alpha amylase catalytic region; KEGG: sro:Sros_3336 glycosidase-like protein; PFAM: alpha amylase catalytic region; Carbohydrate binding family 25; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.
    
 0.432
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.