STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47060.1PFAM: GPW/gp25 family protein; KEGG: cak:Caul_1566 gpW/GP25 family protein. (149 aa)    
Predicted Functional Partners:
ADL47054.1
KEGG: aau:AAur_3609 putative phage tail sheath family protein.
 
 
 0.999
ADL47061.1
KEGG: aau:AAur_3615 putative phage-related protein.
 
 
 0.998
ADL47055.1
KEGG: aau:AAur_3610 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: Phage T4-like virus tail tube gp19.
 
   0.996
ADL47057.1
KEGG: aau:AAur_3611 hypothetical protein.
 
   0.996
ADL47062.1
KEGG: pca:Pcar_2888 hypothetical protein.
 
 
 0.996
ADL47058.1
TIGRFAM: Rhs element Vgr protein; KEGG: aau:AAur_3612 putative phage-related protein.
 
  
 0.972
ADL45336.1
Transcriptional activator domain; KEGG: fre:Franean1_2587 response regulator receiver/SARP domain-containing protein; manually curated; PFAM: transcriptional activator domain; Peptidoglycan-binding lysin domain.
  
   0.924
ADL46881.1
Transglycosylase-like domain protein; KEGG: sgr:SGR_745 M23 family secreted peptidase; PFAM: Transglycosylase-like domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
   0.921
ADL47059.1
KEGG: aau:AAur_3613 hypothetical protein.
       0.811
ADL47063.1
KEGG: sna:Snas_3258 hypothetical protein.
       0.794
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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