STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47063.1KEGG: sna:Snas_3258 hypothetical protein. (306 aa)    
Predicted Functional Partners:
ADL47059.1
KEGG: aau:AAur_3613 hypothetical protein.
       0.825
ADL47062.1
KEGG: pca:Pcar_2888 hypothetical protein.
       0.825
ADL47057.1
KEGG: aau:AAur_3611 hypothetical protein.
     
 0.804
ADL47058.1
TIGRFAM: Rhs element Vgr protein; KEGG: aau:AAur_3612 putative phage-related protein.
       0.802
ADL47060.1
PFAM: GPW/gp25 family protein; KEGG: cak:Caul_1566 gpW/GP25 family protein.
       0.794
ADL47061.1
KEGG: aau:AAur_3615 putative phage-related protein.
       0.792
ADL47054.1
KEGG: aau:AAur_3609 putative phage tail sheath family protein.
       0.780
ADL47055.1
KEGG: aau:AAur_3610 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: Phage T4-like virus tail tube gp19.
       0.778
ADL47056.1
Hypothetical protein; KEGG: ecb:100033877 collagen, type I, alpha 1.
       0.773
ADL47053.1
KEGG: mxa:MXAN_6364 hypothetical protein.
       0.743
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.