STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47102.1PFAM: YCII-related; KEGG: sma:SAV_1196 hypothetical protein. (116 aa)    
Predicted Functional Partners:
ADL47101.1
KEGG: cwo:Cwoe_2465 putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
 
     0.948
ADL49456.1
KEGG: kfl:Kfla_2784 putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
 
     0.779
ADL44151.1
KEGG: cwo:Cwoe_3324 putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
 
     0.774
ADL46716.1
PFAM: Sigma-70 region 4 type 2; KEGG: bcv:Bcav_0382 putative RNA polymerase, sigma-24 subunit, ECF subfamily.
 
     0.772
ADL44152.1
PFAM: YCII-related; KEGG: cwo:Cwoe_3323 YCII-related protein.
  
     0.767
ADL46815.1
KEGG: fre:Franean1_4326 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
 
     0.766
ADL46714.1
PFAM: YCII-related; KEGG: bcv:Bcav_0383 YCII-related protein.
  
     0.730
ADL47103.1
Amine oxidase; KEGG: azl:AZL_b03560 monoamine oxidase; manually curated; PFAM: amine oxidase.
       0.537
ADL47099.1
ABC transporter related; KEGG: svi:Svir_23010 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.485
ADL47100.1
ABC transporter related; KEGG: svi:Svir_23020 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.485
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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