STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47124.1KEGG: sco:SCO1292 secreted protein. (849 aa)    
Predicted Functional Partners:
ADL47123.1
KEGG: sco:SCO1291 hypothetical protein.
 
     0.959
ADL44552.1
KEGG: stp:Strop_0483 hypothetical protein.
  
     0.654
ADL47122.1
PFAM: GCN5-related N-acetyltransferase; KEGG: sro:Sros_7751 acetyltransferase including N-acetylase of ribosomal protein-like protein.
 
     0.648
ADL49000.1
KEGG: sna:Snas_1220 hypothetical protein.
  
     0.631
ADL48700.1
KEGG: sna:Snas_2071 WGR domain-containing protein; PFAM: WGR domain-containing protein; SMART: WGR domain-containing protein.
 
     0.617
ADL46795.1
KEGG: sro:Sros_3297 hypothetical protein.
  
     0.583
ADL44089.1
Hypothetical protein; KEGG: sgr:SGR_6854 putative secreted protein.
  
     0.577
ADL48692.1
KEGG: sna:Snas_2708 cellulose-binding family II; PFAM: cellulose-binding family II; Fibronectin type III domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein.
  
     0.551
ADL49123.1
PFAM: YCII-related; KEGG: sco:SCO7731 hypothetical protein.
  
     0.549
ADL48153.1
KEGG: hypothetical protein.
  
     0.538
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.