STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47229.1Ricin B lectin; KEGG: scb:SCAB_27581 putative hydrolase; PFAM: Ricin B lectin; SMART: Ricin B lectin. (527 aa)    
Predicted Functional Partners:
ADL45504.1
PFAM: Ricin B lectin; KEGG: scb:SCAB_79481 putative xylanase A.
  
     0.756
ADL47224.1
KEGG: cai:Caci_6475 ricin B lectin; PFAM: Ricin B lectin; SMART: Ricin B lectin.
  
     0.741
ADL44613.1
KEGG: saq:Sare_0964 ricin B lectin; PFAM: Ricin B lectin; SMART: Ricin B lectin.
  
     0.637
ADL49646.1
KEGG: saq:Sare_4538 hypothetical protein.
   
    0.597
ADL43914.1
PFAM: Terpene synthase metal-binding domain-containing protein; KEGG: rxy:Rxyl_0493 terpene synthase, metal-binding protein.
 
     0.520
ADL47951.1
PFAM: Terpene synthase metal-binding domain-containing protein; KEGG: sro:Sros_6866 hypothetical protein.
 
     0.509
ADL43680.1
PFAM: NLP/P60 protein; KEGG: saq:Sare_0060 NLP/P60 protein.
  
  
 0.467
ADL43682.1
PFAM: NLP/P60 protein; KEGG: stp:Strop_0055 NLP/P60 protein.
  
  
 0.467
ADL49492.1
Alpha-N-arabinofuranosidase; PFAM: Ricin B lectin; KEGG: ami:Amir_4966 alpha-N-arabinofuranosidase; SMART: Ricin B lectin.
 
  
 0.442
ADL49656.1
KEGG: saq:Sare_4988 hypothetical protein.
 
    0.432
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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