STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47270.1PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: peptidase M20. (454 aa)    
Predicted Functional Partners:
ADL47271.1
PFAM: alpha/beta hydrolase fold; KEGG: vap:Vapar_1487 alpha/beta hydrolase fold protein.
 
 
 
 0.824
ADL47273.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: cai:Caci_0659 protein of unknown function DUF6 transmembrane.
       0.784
ADL47272.1
Peroxiredoxin, Ohr subfamily; KEGG: rop:ROP_49730 putative organic hydroperoxide resistance protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein.
       0.773
ADL47269.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_4672 putative 3-oxoacyl-(acyl-carrier-protein) reductase.
   
   0.678
ADL47275.1
Formyl-CoA transferase; KEGG: nca:Noca_4083 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
    0.637
ADL47274.1
KEGG: sro:Sros_6599 putative transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR.
       0.633
ADL47277.1
PFAM: MmgE/PrpD family protein; KEGG: nca:Noca_4085 MmgE/PrpD family protein.
 
    0.622
ADL47278.1
PFAM: amidohydrolase; KEGG: nca:Noca_4086 amidohydrolase.
  
  
 0.595
ADL47266.1
KEGG: sti:Sthe_1497 NMT1/THI5 like domain protein.
 
   
 0.594
ADL47268.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sti:Sthe_1498 binding-protein-dependent transport systems inner membrane component.
 
     0.558
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.