STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47281.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sen:SACE_3371 3-oxoacyl-[acyl-carrier-protein] reductase. (249 aa)    
Predicted Functional Partners:
ADL47282.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reu:Reut_B4564 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
   
   0.783
ADL47285.1
KEGG: sro:Sros_6621 formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
   
   0.777
ADL47283.1
PFAM: pyruvate carboxyltransferase; KEGG: fre:Franean1_3719 pyruvate carboxyltransferase.
       0.773
ADL47284.1
PFAM: protein of unknown function DUF336; KEGG: pzu:PHZ_c2132 hypothetical protein.
       0.773
ADL47287.1
PFAM: amidohydrolase 2; KEGG: aau:AAur_0870 amidohydrolase family protein.
  
    0.772
ADL47286.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: aau:AAur_0871 NifU-like domain-containing protein.
       0.768
ADL47288.1
PFAM: inner-membrane translocator; KEGG: nca:Noca_0808 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.768
ADL47289.1
KEGG: mlo:mll7666 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.768
ADL47290.1
KEGG: nca:Noca_0806 ABC-type sugar transport system periplasmic component-like.
       0.768
ADL43918.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ami:Amir_2536 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
 0.738
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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