STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47356.1KEGG: saq:Sare_4840 hypothetical protein. (1011 aa)    
Predicted Functional Partners:
ADL48209.1
PFAM: Transketolase domain-containing protein; Transketolase central region; KEGG: stp:Strop_3370 transketolase domain-containing protein.
  
 0.994
ADL47362.1
KEGG: saq:Sare_4835 hypothetical protein.
 
     0.944
ADL47358.1
Secretion protein snm4; KEGG: saq:Sare_4838 hypothetical protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571.
 
     0.941
ADL48728.1
2-oxoglutarate dehydrogenase, E1 subunit; KEGG: saq:Sare_4070 alpha-ketoglutarate decarboxylase; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; catalytic domain-containing protein of components of various dehydrogenase complexes.
  
 0.941
ADL47355.1
KEGG: saq:Sare_4841 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; Parallel beta-helix repeat.
 
  
 0.937
ADL47357.1
PFAM: protein of unknown function DUF690; KEGG: saq:Sare_4839 hypothetical protein.
 
     0.918
ADL47359.1
KEGG: saq:Sare_4837 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
 
   
 0.825
ADL47366.1
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
 
     0.763
ADL47360.1
KEGG: saq:Sare_4836 hypothetical protein.
       0.752
ADL47361.1
KEGG: saq:Sare_4835 hypothetical protein.
       0.752
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.