STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47536.1PFAM: C-methyltransferase; Methyltransferase type 11; Methyltransferase domain protein; KEGG: tcu:Tcur_2759 C-methyltransferase. (405 aa)    
Predicted Functional Partners:
ADL47511.1
Glutamine--scyllo-inositol transaminase; KEGG: svi:Svir_29860 predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
  0.939
ADL47528.1
KEGG: stp:Strop_2217 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related.
    
 0.917
ADL47510.1
PFAM: NDP-hexose 23-dehydratase; KEGG: scb:SCAB_83991 putative NDP-hexose 2,3-dehydratase.
 
   
 0.594
ADL47537.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mbt:JTY_3180 putative dioxygenase.
       0.584
ADL47538.1
PFAM: Phytanoyl-CoA dioxygenase; KEGG: ttr:Tter_2355 phytanoyl-CoA dioxygenase.
  
  
 0.512
ADL47505.1
PFAM: protein of unknown function DUF1205; KEGG: saq:Sare_2033 hypothetical protein.
  
     0.414
ADL47539.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: NAD-dependent epimerase/dehydratase.
  
     0.414
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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