STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47585.1PFAM: Methyltransferase type 12; KEGG: stp:Strop_2858 methyltransferase type 12. (289 aa)    
Predicted Functional Partners:
rpmE2
KEGG: stp:Strop_2857 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31.
   
   0.797
ADL47583.1
KEGG: stp:Strop_2856 cobalamin synthesis CobW domain-containing protein; PFAM: cobalamin synthesis CobW domain protein; cobalamin synthesis protein P47K; SMART: cobalamin synthesis CobW domain protein.
       0.773
ADL47586.1
PFAM: ferric-uptake regulator; KEGG: stp:Strop_2859 ferric-uptake regulator; Belongs to the Fur family.
       0.773
ADL47579.1
KEGG: saq:Sare_2623 hypothetical protein.
 
     0.531
ADL47577.1
KEGG: saq:Sare_2621 cell wall anchor domain-containing protein.
 
     0.524
ADL47438.1
KEGG: stp:Strop_2953 hypothetical protein.
  
     0.513
ADL44221.1
TIGRFAM: DivIVA domain; KEGG: stp:Strop_0703 hypothetical protein.
  
     0.509
ADL45952.1
SMART: regulatory protein LuxR; KEGG: kfl:Kfla_0067 transcriptional regulator, TrmB.
  
     0.487
ADL47457.1
KEGG: stp:Strop_4397 cell wall anchor domain-containing protein.
  
     0.468
ADL46042.1
PFAM: Methyltransferase type 11; KEGG: stp:Strop_0591 methyltransferase type 11.
  
     0.466
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.