STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47589.1Transposase IS116/IS110/IS902 family protein; KEGG: sen:SACE_2352 transposase, IS111A/IS1328/IS1533; PFAM: transposase IS116/IS110/IS902 family protein; SMART: Helix-hairpin-helix DNA-binding class 1. (407 aa)    
Predicted Functional Partners:
ADL47588.1
KEGG: stp:Strop_2379 regulatory protein, MerR.
       0.488
ADL44053.1
KEGG: sgr:SGR_5039 hypothetical protein.
  
     0.444
ADL45971.1
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: mul:MUP043 putative transposase.
  
     0.411
ADL49438.1
KEGG: fal:FRAAL3593 hypothetical protein.
  
     0.404
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.