STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47591.1PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: stp:Strop_3014 cobalamin synthesis protein, P47K. (408 aa)    
Predicted Functional Partners:
rpmF-2
KEGG: saq:Sare_2615 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family.
  
    0.791
ADL47590.1
PFAM: Methyltransferase type 12; KEGG: sgr:SGR_2242 putative methyltransferase.
       0.788
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
 
 0.632
rpsZ
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
 
 0.625
ADL48108.1
PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; cobalbumin biosynthesis protein; KEGG: saq:Sare_3545 cobalbumin biosynthesis protein.
 
   
 0.612
ADL47576.1
PFAM: periplasmic solute binding protein; KEGG: saq:Sare_2620 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.605
ADL48330.1
PFAM: periplasmic solute binding protein; KEGG: saq:Sare_3814 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.605
rpmB-2
KEGG: stp:Strop_2855 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.515
ADL47579.1
KEGG: saq:Sare_2623 hypothetical protein.
  
  
 0.510
rpmB
KEGG: saq:Sare_1167 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.506
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.