STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47609.1KEGG: GCN5-related N-acetyltransferase. (212 aa)    
Predicted Functional Partners:
ADL46083.1
PFAM: Golgi phosphoprotein 3; KEGG: saq:Sare_1965 hypothetical protein.
  
     0.667
ADL48175.1
KEGG: stp:Strop_3359 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.579
ADL45722.1
PFAM: lipolytic protein G-D-S-L family; KEGG: stp:Strop_1739 GDSL family lipase.
  
     0.511
ADL47610.1
KEGG: xce:Xcel_0862 hypothetical protein.
       0.493
ADL47611.1
PFAM: ribosomal RNA adenine methylase transferase; KEGG: sna:Snas_2851 methyltransferase type 11.
       0.486
ADL46835.1
KEGG: peptidase S45 penicillin amidase; PFAM: peptidase S45 penicillin amidase; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein.
  
     0.482
ADL49156.1
KEGG: stp:Strop_0349 hypothetical protein.
  
    0.481
ADL47608.1
KEGG: stp:Strop_1596 hypothetical protein.
       0.466
ADL47612.1
KEGG: tgr:Tgr7_0170 hypothetical protein.
       0.432
ADL48754.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: stp:Strop_3708 TPR repeat-containing protein.
  
     0.416
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.