STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47665.1Integrase family protein; Manually curated; KEGG: ami:Amir_4546 integrase family protein; Belongs to the 'phage' integrase family. (142 aa)    
Predicted Functional Partners:
ADL47666.1
Hypothetical protein; Manually curated; KEGG: sen:SACE_5085 hypothetical protein.
       0.793
ADL47663.1
Integrase family protein; KEGG: sen:SACE_5083 hypothetical protein; manually curated; PFAM: integrase family protein.
      0.732
ADL47664.1
PFAM: transposase mutator type; KEGG: sma:SAV_347 IS256 family transposase.
       0.556
ADL49101.1
TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: saq:Sare_0447 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase; helicase domain protein.
  
  
 0.416
ADL48823.1
PFAM: Prephenate dehydrogenase; KEGG: stp:Strop_3757 prephenate dehydrogenase.
  
    0.400
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.