STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47746.1PFAM: protein of unknown function DUF107; KEGG: stp:Strop_3019 hypothetical protein. (157 aa)    
Predicted Functional Partners:
ADL47745.1
KEGG: saq:Sare_3244 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein.
 
  
 0.984
ADL49770.1
KEGG: saq:Sare_5091 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein.
  
  
 0.820
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.800
ADL47747.1
PFAM: beta-lactamase; KEGG: kfl:Kfla_3179 beta-lactamase.
  
  
 0.656
ADL46633.1
PFAM: protein of unknown function DUF307; KEGG: saq:Sare_0233 hypothetical protein.
   
    0.598
ADL47749.1
KEGG: stp:Strop_3021 hypothetical protein.
     
 0.526
ADL47744.1
KEGG: saq:Sare_3243 hypothetical protein.
       0.505
ADL48362.1
KEGG: stp:Strop_3457 hypothetical protein.
   
  
 0.503
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
   
    0.433
ADL44971.1
PFAM: phosphatidate cytidylyltransferase; KEGG: saq:Sare_1234 phosphatidate cytidylyltransferase; Belongs to the CDS family.
   
    0.426
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.