STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47757.1PFAM: ATPase associated with various cellular activities AAA_3; KEGG: saq:Sare_3254 ATPase. (368 aa)    
Predicted Functional Partners:
ADL47756.1
PFAM: protein of unknown function DUF58; erythromycin resistance leader peptide-1; KEGG: saq:Sare_3253 hypothetical protein.
  
 0.953
ADL47755.1
KEGG: saq:Sare_3252 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A.
 
    0.906
ADL44880.1
PFAM: protein of unknown function DUF58; KEGG: saq:Sare_1136 hypothetical protein.
  
 0.776
ADL44881.1
KEGG: stp:Strop_1247 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A.
 
    0.643
ADL47758.1
KEGG: stp:Strop_3029 hypothetical protein.
       0.497
ADL48001.1
KEGG: saq:Sare_3460 transglutaminase domain-containing protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein.
 
   
 0.433
ADL47671.1
PFAM: protein of unknown function DUF58; KEGG: stp:Strop_2913 hypothetical protein.
 
  
 0.418
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.