STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47798.1PFAM: protein of unknown function ATP binding; KEGG: saq:Sare_1292 protein of unknown function ATP binding. (202 aa)    
Predicted Functional Partners:
ADL47800.1
PFAM: Roadblock/LC7 family protein; KEGG: tcu:Tcur_3809 roadblock/LC7 family protein.
 
 
 0.978
ADL47799.1
PFAM: protein of unknown function DUF742; KEGG: saq:Sare_1291 hypothetical protein.
 
   
 0.951
ADL48567.1
PFAM: Roadblock/LC7 family protein; KEGG: saq:Sare_3979 roadblock/LC7 family protein.
 
 
 0.910
ADL47801.1
KEGG: saq:Sare_1289 histidine kinase; PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein.
 
     0.901
ADL44353.1
PFAM: Roadblock/LC7 family protein; KEGG: stp:Strop_0817 roadblock/LC7 family protein.
 
 
 0.898
ADL47682.1
PFAM: Roadblock/LC7 family protein; KEGG: cai:Caci_7863 roadblock/LC7 family protein.
 
 
 0.898
ADL48979.1
PFAM: Roadblock/LC7 family protein; KEGG: stp:Strop_3874 roadblock/LC7 family protein.
 
 
 0.898
ADL49268.1
PFAM: Roadblock/LC7 family protein; KEGG: scb:SCAB_4671 hypothetical protein.
 
 
 0.897
ADL47619.1
PFAM: Roadblock/LC7 family protein; KEGG: stp:Strop_0758 roadblock/LC7 family protein.
 
 
 0.896
ADL48304.1
PFAM: Roadblock/LC7 family protein; KEGG: sna:Snas_1515 roadblock/LC7 family protein.
 
 
 0.896
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.