STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47881.1KEGG: saq:Sare_3365 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (299 aa)    
Predicted Functional Partners:
ADL47786.1
KEGG: saq:Sare_1433 hypothetical protein.
  
     0.771
ADL48492.1
KEGG: saq:Sare_4868 XRE family plasmid maintenance system antidote protein.
  
     0.771
ADL48799.1
PFAM: protein of unknown function DUF397; KEGG: stp:Strop_3743 hypothetical protein.
  
     0.771
ADL48385.1
PFAM: protein of unknown function DUF397; KEGG: stp:Strop_3476 hypothetical protein.
  
     0.765
ADL44903.1
PFAM: protein of unknown function DUF397; KEGG: saq:Sare_1159 hypothetical protein.
  
     0.752
ADL46331.1
PFAM: protein of unknown function DUF397; KEGG: stp:Strop_2090 hypothetical protein.
  
     0.749
ADL46333.1
PFAM: protein of unknown function DUF574; KEGG: fra:Francci3_1614 hypothetical protein.
  
     0.744
ADL47624.1
KEGG: scb:SCAB_57601 hypothetical protein.
  
     0.728
ADL43658.1
Protein of unknown function DUF397; KEGG: saq:Sare_0042 hypothetical protein; manually curated; PFAM: protein of unknown function DUF397.
  
     0.727
ADL47787.1
PFAM: protein of unknown function DUF397; KEGG: saq:Sare_1432 hypothetical protein.
  
     0.727
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.