STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47888.1KEGG: saq:Sare_3370 methyltransferase type 11; manually curated; PFAM: Methyltransferase type 11. (267 aa)    
Predicted Functional Partners:
ADL49710.1
KEGG: stp:Strop_4516 hypothetical protein.
  
     0.661
ADL47889.1
PFAM: protein of unknown function DUF820; KEGG: tcu:Tcur_3383 protein of unknown function DUF820.
       0.521
ADL43792.1
KEGG: saq:Sare_0170 DNA binding domain-containing protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR.
  
     0.517
ADL47887.1
PFAM: RNA binding S1 domain protein; KEGG: stp:Strop_3140 30S ribosomal protein S1.
       0.502
ADL47890.1
PFAM: Protein of unknown function DUF2945; KEGG: rha:RHA1_ro03433 hypothetical protein.
       0.501
ADL43916.1
KEGG: saq:Sare_4511 DNA binding domain-containing protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR.
  
     0.472
ADL48021.1
KEGG: stp:Strop_3252 hypothetical protein.
  
     0.460
ADL47891.1
PFAM: Protein of unknown function DUF3140; KEGG: saq:Sare_3371 hypothetical protein.
       0.447
ADL45002.1
PFAM: protein of unknown function DUF456; KEGG: nca:Noca_2960 hypothetical protein.
  
     0.443
ADL46472.1
KEGG: saq:Sare_2353 hypothetical protein.
  
     0.413
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.