STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47894.1Regulatory protein MerR; KEGG: sma:SAV_3548 MerR family transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR. (135 aa)    
Predicted Functional Partners:
ADL47893.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sma:SAV_3547 ketoreductase.
       0.773
ADL46462.1
Regulatory protein MerR; KEGG: kfl:Kfla_1249 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR.
  
     0.723
ADL47892.1
PFAM: Abortive infection protein; KEGG: sro:Sros_5184 hypothetical protein.
       0.639
ADL47890.1
PFAM: Protein of unknown function DUF2945; KEGG: rha:RHA1_ro03433 hypothetical protein.
 
     0.593
ADL47942.1
Regulatory protein MerR; KEGG: avn:Avin_02350 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR.
  
     0.591
ADL47891.1
PFAM: Protein of unknown function DUF3140; KEGG: saq:Sare_3371 hypothetical protein.
       0.531
ADL47889.1
PFAM: protein of unknown function DUF820; KEGG: tcu:Tcur_3383 protein of unknown function DUF820.
 
     0.529
ADL44627.1
KEGG: stp:Strop_1079 TipAS antibiotic-recognition domain-containing protein; PFAM: TipAS antibiotic-recognition domain-containing protein; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR.
  
     0.473
ADL49652.1
TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: saq:Sare_4984 MerR family transcriptional regulator; SMART: regulatory protein MerR.
  
     0.446
ADL47214.1
TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation protein E; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: kfl:Kfla_4457 multi-sensor signal transduction histidine kinase; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; protein phosphatase 2C domain protein.
   
 
 0.438
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.