STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47912.1PFAM: protein of unknown function DUF81; KEGG: saq:Sare_3380 hypothetical protein. (347 aa)    
Predicted Functional Partners:
ADL48747.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: saq:Sare_4082 cobalamin (vitamin B12) biosynthesis CbiX protein.
     
 0.711
ADL47913.1
KEGG: stp:Strop_3156 Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074.
 
     0.615
ADL48749.1
KEGG: saq:Sare_4084 hypothetical protein.
     
 0.568
ADL48750.1
KEGG: saq:Sare_4085 sulfite reductase (ferredoxin); PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
   
 0.568
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: saq:Sare_1880 phenylalanyl-tRNA synthetase, beta subunit.
     
 0.562
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.547
ADL44321.1
TIGRFAM: sulfate adenylyltransferase, small subunit; KEGG: stp:Strop_0793 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase.
 
  
 0.488
ADL44322.1
Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.473
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.