STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47953.1KEGG: saq:Sare_3409 low temperature requirement A. (423 aa)    
Predicted Functional Partners:
ADL47954.1
Aminotransferase class I and II; KEGG: saq:Sare_3410 transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
     0.580
ADL49751.1
KEGG: saq:Sare_5061 hypothetical protein.
  
     0.541
ADL45624.1
KEGG: saq:Sare_1677 hypothetical protein.
  
     0.515
ADL46078.1
KEGG: saq:Sare_2057 hypothetical protein.
  
     0.475
ADL46350.1
KEGG: stp:Strop_3431 hypothetical protein.
  
     0.474
ADL47855.1
KEGG: stp:Strop_3431 hypothetical protein.
  
     0.473
ADL48323.1
KEGG: stp:Strop_3431 hypothetical protein.
  
     0.465
ADL49346.1
KEGG: saq:Sare_4698 hypothetical protein.
  
     0.461
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.