STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47976.1PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: gob:Gobs_3251 sodium/hydrogen exchanger. (501 aa)    
Predicted Functional Partners:
ADL47977.1
PFAM: protein of unknown function DUF167; KEGG: stp:Strop_3204 hypothetical protein; Belongs to the UPF0235 family.
       0.830
ADL47978.1
KEGG: gob:Gobs_3253 hypothetical protein.
 
     0.782
ADL47979.1
DivIVA domain; KEGG: stp:Strop_3206 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein.
       0.539
ADL47975.1
KEGG: saq:Sare_3429 TraR/DksA family transcriptional regulator.
  
    0.459
ADL47980.1
PFAM: protein of unknown function YGGT; KEGG: saq:Sare_3433 hypothetical protein.
       0.456
ADL47973.1
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.455
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.454
ADL45159.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: saq:Sare_1450 TrkA domain-containing protein.
 
   
 0.448
ADL45160.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: saq:Sare_1451 TrkA domain-containing protein.
 
   
 0.444
sepF
Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
       0.414
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.