STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL47978.1KEGG: gob:Gobs_3253 hypothetical protein. (278 aa)    
Predicted Functional Partners:
ADL47979.1
DivIVA domain; KEGG: stp:Strop_3206 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein.
 
    0.930
ADL47977.1
PFAM: protein of unknown function DUF167; KEGG: stp:Strop_3204 hypothetical protein; Belongs to the UPF0235 family.
       0.809
ADL47976.1
PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: gob:Gobs_3251 sodium/hydrogen exchanger.
 
     0.782
ADL44838.1
PFAM: CheW domain protein; KEGG: stp:Strop_1226 hypothetical protein.
  
     0.713
ADL48931.1
KEGG: stp:Strop_3838 hypothetical protein.
  
     0.609
ADL48802.1
PFAM: peptidase M16 domain protein; KEGG: stp:Strop_3746 peptidase M16 domain-containing protein.
  
     0.607
ADL47980.1
PFAM: protein of unknown function YGGT; KEGG: saq:Sare_3433 hypothetical protein.
       0.605
ADL48047.1
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.583
ADL48312.1
KEGG: saq:Sare_3801 hypothetical protein.
  
     0.583
sepF
Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
       0.565
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.