STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsmHS-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (391 aa)    
Predicted Functional Partners:
mraZ
MraZ protein; KEGG: saq:Sare_3447 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain; Belongs to the MraZ family.
  
 0.993
ADL47991.1
KEGG: saq:Sare_3444 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerization domain.
  
  
 0.945
ADL47992.1
KEGG: saq:Sare_3445 hypothetical protein.
  
  
 0.942
ADL46302.1
Rhodanese domain protein; KEGG: saq:Sare_2225 beta-lactamase domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; beta-lactamase domain protein.
   
   0.898
ADL47189.1
KEGG: tfu:Tfu_3085 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: beta-lactamase domain protein; Rhodanese domain protein.
   
   0.898
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: saq:Sare_1880 phenylalanyl-tRNA synthetase, beta subunit.
 
  
 0.826
murE
UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
 
  
 0.822
rpsI
PFAM: ribosomal protein S9; KEGG: saq:Sare_4253 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
 
 
 0.814
rpsB
KEGG: stp:Strop_1322 ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
 
 
 0.801
rpsP
KEGG: saq:Sare_1194 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
 
 0.793
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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