STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48016.1KEGG: stp:Strop_3248 phytoene dehydrogenase-related protein; TIGRFAM: phytoene desaturase; PFAM: amine oxidase. (495 aa)    
Predicted Functional Partners:
ADL43813.1
Phytoene synthase; KEGG: saq:Sare_4931 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase.
  
 0.948
ADL48014.1
PFAM: protein of unknown function DUF422; KEGG: stp:Strop_3246 hypothetical protein.
 
   
 0.933
ADL48015.1
PFAM: glycosyl transferase family 2; KEGG: saq:Sare_3474 glycosyl transferase family protein.
 
   
 0.929
ADL48012.1
KEGG: stp:Strop_3244 hypothetical protein.
 
  
 0.875
ADL46813.1
PFAM: Lycopene beta and epsilon cyclase; KEGG: stp:Strop_2408 lycopene beta and epsilon cyclase.
 
  
 0.682
ADL48013.1
PFAM: GCN5-related N-acetyltransferase; KEGG: stp:Strop_3245 GCN5-related N-acetyltransferase.
     
 0.610
ADL47419.1
Beta-ketoacyl synthase; KEGG: cai:Caci_2598 KR domain protein; PFAM: Beta-ketoacyl synthase; KR domain protein; Enoyl-CoA hydratase/isomerase; phosphopantetheine-binding; Methyltransferase type 12; aromatic amino acid beta-eliminating lyase/threonine aldolase; alpha/beta hydrolase fold; SMART: Polyketide synthase, beta-ketoacyl synthase region; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase/Fatty acid synthase, KR.
  
  
 0.572
ADL48011.1
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: saq:Sare_3470 YbaK/prolyl-tRNA synthetase associated region.
       0.536
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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