STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48047.1Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. (167 aa)    
Predicted Functional Partners:
ADL45064.1
PFAM: PspA/IM30 family protein; KEGG: saq:Sare_1358 phage shock protein A, PspA.
  
     0.772
ADL48909.1
TIGRFAM: chorismate mutase; PFAM: Chorismate mutase, type II; KEGG: saq:Sare_4208 chorismate mutase; SMART: Chorismate mutase.
  
     0.772
ADL48931.1
KEGG: stp:Strop_3838 hypothetical protein.
  
     0.764
ADL45142.1
KEGG: saq:Sare_1434 hypothetical protein.
  
     0.752
ADL48534.1
KEGG: saq:Sare_3956 hypothetical protein.
  
     0.749
ADL48462.1
KEGG: stp:Strop_3540 hypothetical protein.
  
     0.746
ADL47809.1
PFAM: regulatory protein TetR; KEGG: saq:Sare_3293 TetR family transcriptional regulator.
  
     0.734
ADL48013.1
PFAM: GCN5-related N-acetyltransferase; KEGG: stp:Strop_3245 GCN5-related N-acetyltransferase.
  
     0.730
thyX
Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
  
     0.729
ADL46443.1
Hypothetical protein; Manually curated; KEGG: saq:Sare_2315 hypothetical protein.
  
     0.711
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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