STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48058.1KEGG: saq:Sare_3507 hypothetical protein. (211 aa)    
Predicted Functional Partners:
ADL48059.1
PFAM: Polyketide cyclase/dehydrase; KEGG: saq:Sare_3508 cyclase/dehydrase.
       0.818
ADL48057.1
KEGG: saq:Sare_3506 ROK family glucokinase; TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein.
       0.634
ADL48056.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: saq:Sare_3505 endonuclease/exonuclease/phosphatase.
       0.604
ADL48060.1
PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_3277 AMP-dependent synthetase and ligase.
       0.465
ADL48061.1
KEGG: saq:Sare_3510 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerization and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein.
       0.457
ADL48062.1
KEGG: stp:Strop_3279 response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR.
       0.431
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.