STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48089.1KEGG: saq:Sare_3536 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family. (122 aa)    
Predicted Functional Partners:
ADL47826.1
KEGG: stp:Strop_3078 NifU family SUF system FeS assembly protein; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein.
  
  
 0.817
ADL45330.1
PFAM: glutaredoxin; KEGG: noc:Noc_2427 glutaredoxin-like protein.
  
 0.779
ADL48728.1
2-oxoglutarate dehydrogenase, E1 subunit; KEGG: saq:Sare_4070 alpha-ketoglutarate decarboxylase; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; catalytic domain-containing protein of components of various dehydrogenase complexes.
  
   
 0.720
ADL44821.1
Cysteine desulfurase; KEGG: stp:Strop_1213 aminotransferase, class V; PFAM: aminotransferase class V.
 
  
 0.668
ADL48085.1
PFAM: aminotransferase class V; KEGG: stp:Strop_3301 aminotransferase, class V.
 
  
 0.662
ADL47286.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: aau:AAur_0871 NifU-like domain-containing protein.
  
 
 0.632
ADL48090.1
TIGRFAM: glycerate kinase; KEGG: saq:Sare_3537 glycerate kinase; PFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.608
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.591
ADL48088.1
PFAM: PfkB domain protein; KEGG: stp:Strop_3303 ribokinase-like domain-containing protein.
       0.587
ADL49211.1
Folate-binding protein YgfZ; KEGG: saq:Sare_0376 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; Belongs to the GcvT family.
 
 
 0.570
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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