STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48102.1KEGG: saq:Sare_3541 TPR repeat-containing protein. (621 aa)    
Predicted Functional Partners:
ADL45542.1
PFAM: sulfotransferase; KEGG: stp:Strop_1735 sulfotransferase.
  
     0.744
ADL47871.1
PFAM: Lytic transglycosylase catalytic; KEGG: stp:Strop_3130 lytic transglycosylase, catalytic.
  
     0.692
ADL44467.1
KEGG: stp:Strop_0900 hypothetical protein.
  
     0.638
ADL48461.1
Hypothetical protein; Manually curated; KEGG: stp:Strop_3539 hypothetical protein.
  
     0.619
ADL49386.1
PFAM: cell divisionFtsK/SpoIIIE; KEGG: stp:Strop_4305 cell divisionFtsK/SpoIIIE.
  
     0.599
ADL49381.1
KEGG: stp:Strop_4300 hypothetical protein.
  
     0.585
ADL49334.1
KEGG: saq:Sare_4689 TPR repeat-containing protein; manually curated; PFAM: Tetratricopeptide TPR_1 repeat-containing protein.
 
 
 0.574
ADL47579.1
KEGG: saq:Sare_2623 hypothetical protein.
  
     0.572
ADL49366.1
KEGG: saq:Sare_4722 hypothetical protein.
  
     0.570
ADL43641.1
PFAM: ATP-binding region ATPase domain protein; KEGG: tcu:Tcur_4208 ATP-binding region ATPase domain protein.
   
 0.569
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.