STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vgbStreptogramin lyase family protein; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. (297 aa)    
Predicted Functional Partners:
ADL44514.1
SMART: regulatory protein ArsR; KEGG: sro:Sros_4515 putative transcriptional regulator, ArsR family.
  
     0.645
ADL46204.1
Regulatory protein ArsR; KEGG: scb:SCAB_9961 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
  
     0.615
ADL45170.1
KEGG: kfl:Kfla_1031 hypothetical protein.
  
     0.551
ADL43930.1
KEGG: sma:SAV_6915 hypothetical protein.
  
     0.545
ADL44931.1
SMART: regulatory protein ArsR; KEGG: kfl:Kfla_0478 regulatory protein ArsR.
  
     0.543
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.530
ADL48142.1
KEGG: stp:Strop_3338 hypothetical protein.
       0.506
ADL47020.1
Acetyltransferase; KEGG: sco:SCO0294 acetyltransferase.
     
 0.458
ADL45701.1
TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; DEAD/DEAH box helicase domain protein; protein of unknown function DUF1605; KEGG: stp:Strop_1712 ATP-dependent helicase HrpA; SMART: helicase-associated domain protein; DEAD-like helicase; helicase domain protein; AAA ATPase.
      
 0.408
ADL48164.1
KEGG: rer:RER_04160 hypothetical protein.
  
     0.406
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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