STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48146.1PFAM: protein of unknown function DUF350; KEGG: tfu:Tfu_2235 hypothetical protein. (141 aa)    
Predicted Functional Partners:
ADL43736.1
KEGG: saq:Sare_0121 hypothetical protein.
 
     0.788
ADL43737.1
KEGG: saq:Sare_0122 hypothetical protein.
 
     0.714
speE
Spermine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.712
ADL48145.1
KEGG: cms:CMS_2339 putative transcriptional regulator.
       0.679
ADL48147.1
KEGG: saq:Sare_3584 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
       0.590
ADL49010.1
PFAM: protein of unknown function DUF1707; KEGG: saq:Sare_4292 hypothetical protein.
  
     0.530
ADL48144.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: scb:SCAB_43791 hypothetical protein.
       0.467
ADL49126.1
KEGG: saq:Sare_0436 tetratricopeptide domain-containing protein.
  
     0.466
ADL49471.1
PHP domain protein; KEGG: saq:Sare_0226 hypothetical protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein.
  
  
 0.434
ADL49000.1
KEGG: sna:Snas_1220 hypothetical protein.
  
     0.416
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.