STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48176.1PFAM: Bifunctional DNA primase/polymerase; KEGG: stp:Strop_3360 hypothetical protein. (223 aa)    
Predicted Functional Partners:
ADL48175.1
KEGG: stp:Strop_3359 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
     0.743
ADL48798.1
SMART: helix-turn-helix domain protein; KEGG: saq:Sare_4123 helix-turn-helix domain-containing protein.
  
     0.742
ADL44904.1
KEGG: saq:Sare_1160 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.734
ADL48312.1
KEGG: saq:Sare_3801 hypothetical protein.
  
     0.734
ADL43657.1
Helix-turn-helix domain protein; KEGG: saq:Sare_0041 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.723
ADL45000.1
PFAM: protein of unknown function DUF574; KEGG: saq:Sare_1317 hypothetical protein.
  
     0.717
ADL47786.1
KEGG: saq:Sare_1433 hypothetical protein.
  
     0.716
ADL45279.1
KEGG: stp:Strop_1596 hypothetical protein.
  
     0.683
ADL48063.1
PFAM: protein of unknown function DUF574; KEGG: stp:Strop_3280 hypothetical protein.
  
     0.667
ADL45710.1
KEGG: saq:Sare_1713 hypothetical protein.
  
     0.657
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.