STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48241.1KEGG: saq:Sare_3637 hypothetical protein. (147 aa)    
Predicted Functional Partners:
ADL48242.1
Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_3395 alcohol dehydrogenase; manually curated; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein.
 
    0.852
ADL48243.1
KEGG: saq:Sare_3639 saccharopine dehydrogenase (NAD(+), L-glutamate-forming); PFAM: Saccharopine dehydrogenase.
       0.681
ADL48244.1
DNA polymerase III beta chain; KEGG: saq:Sare_0479 MerR family transcriptional regulator; PFAM: DNA polymerase III beta chain; regulatory protein MerR; SMART: regulatory protein MerR; DNA polymerase III beta chain.
       0.589
ADL48240.1
KEGG: stp:Strop_3393 regulatory protein, LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; AAA ATPase.
       0.531
ADL49292.1
KEGG: stp:Strop_0239 hypothetical protein.
  
     0.483
ADL45610.1
KEGG: kra:Krad_0814 hypothetical protein.
  
     0.455
ADL46954.1
PFAM: glycoside hydrolase family 43; KEGG: kfl:Kfla_0049 glycoside hydrolase family 43.
  
     0.450
ADL49538.1
KEGG: rxy:Rxyl_0665 hypothetical protein.
  
    0.445
ADL48392.1
KEGG: saq:Sare_3857 hypothetical protein.
  
     0.440
ADL45754.1
KEGG: rha:RHA1_ro02005 hypothetical protein.
  
     0.439
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.