STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-2PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (139 aa)    
Predicted Functional Partners:
ADL48254.1
PFAM: Protein of unknown function DUF2191; KEGG: sma:SAV_5693 hypothetical protein.
  
 
 0.883
ADL44688.1
PFAM: DUF234 DEXX-box ATPase; KEGG: sro:Sros_1281 hypothetical protein.
  
     0.568
ADL48253.1
KEGG: fre:Franean1_1606 hypothetical protein.
       0.541
ADL45048.1
PFAM: protein of unknown function DUF1006; KEGG: saq:Sare_1344 hypothetical protein.
     
 0.488
ADL45448.1
PFAM: major facilitator superfamily MFS_1; KEGG: kfl:Kfla_6636 major facilitator superfamily MFS_1.
  
     0.482
ADL49335.1
Transcriptional activator domain; KEGG: kfl:Kfla_2694 transcriptional regulator, SARP family; PFAM: transcriptional activator domain; protein of unknown function DUF1470; transcriptional regulator domain-containing protein; Zinc finger, CGNR; SMART: transcriptional regulator domain-containing protein.
  
     0.451
ADL43954.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.441
ADL48310.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.432
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.