STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48292.1PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: sco:SCO3241 putative isomerase. (298 aa)    
Predicted Functional Partners:
ADL48291.1
KEGG: scb:SCAB_17891 hypothetical protein.
     0.996
ADL48293.1
PFAM: UbiA prenyltransferase; KEGG: scb:SCAB_17911 hypothetical protein.
 
   
 0.979
ADL48294.1
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: sco:SCO3243 myo-inositol phosphate synthase.
 
     0.979
ADL48290.1
PFAM: TatD-related deoxyribonuclease; KEGG: scb:SCAB_17881 hypothetical protein.
 
  
 0.968
ADL48288.1
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: scb:SCAB_17861 hypothetical protein.
 
   
 0.967
ADL48289.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: scb:SCAB_17871 hypothetical protein.
 
     0.956
ADL47204.1
PFAM: class II aldolase/adducin family protein; KEGG: sna:Snas_2887 class II aldolase/adducin family protein.
  
 
 0.909
araB
L-ribulokinase; KEGG: ami:Amir_1861 L-ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like.
     
 0.901
ADL48286.1
Ricin B lectin; KEGG: scb:SCAB_79381 putative glycosyl hydrolase; PFAM: Ricin B lectin; PKD domain containing protein; Carbohydrate binding family 6; SMART: cellulose binding type IV; Ricin B lectin; PKD domain containing protein.
 
   
 0.874
ADL46156.1
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: svi:Svir_11090 myo-inositol-1-phosphate synthase.
 
     0.798
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.