STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48301.1KEGG: mva:Mvan_1934 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. (763 aa)    
Predicted Functional Partners:
ADL48302.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: mva:Mvan_1935 TRAP transporter solute receptor TAXI family protein.
 
    0.985
ADL48305.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: kfl:Kfla_0933 TRAP transporter solute receptor, TAXI family.
 
    0.941
ADL45646.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: saq:Sare_1695 TRAP transporter solute receptor TAXI family protein.
 
    0.859
ADL48304.1
PFAM: Roadblock/LC7 family protein; KEGG: sna:Snas_1515 roadblock/LC7 family protein.
       0.590
ADL48303.1
KEGG: sna:Snas_1514 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
       0.581
ADL46866.1
KEGG: ami:Amir_2064 superoxide dismutase.
  
     0.428
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.