STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48349.1Lipoprotein; KEGG: sen:SACE_7211 lipoprotein. (253 aa)    
Predicted Functional Partners:
ADL48916.1
PFAM: ATP-binding region ATPase domain protein; PspC domain protein; KEGG: stp:Strop_3825 ATPase domain-containing protein.
  
  
 0.630
ADL49010.1
PFAM: protein of unknown function DUF1707; KEGG: saq:Sare_4292 hypothetical protein.
  
  
 0.595
ADL48923.1
PFAM: PspC domain protein; KEGG: saq:Sare_4222 phage shock protein C, PspC.
 
  
 0.524
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.523
ADL48347.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.499
ADL48251.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sro:Sros_8227 hypothetical protein.
  
     0.488
ADL46806.1
PFAM: proteinase inhibitor I16 subtilisin-type inhibitor; KEGG: sro:Sros_6731 hypothetical protein.
  
     0.487
ADL48917.1
PFAM: PspC domain protein; KEGG: saq:Sare_4216 phage shock protein C, PspC.
 
  
 0.482
ADL46593.1
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.478
ADL47366.1
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.469
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.