STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48378.1Manually curated; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; KEGG: stp:Strop_3469 helix-hairpin-helix repeat-containing competence protein ComEA; SMART: Helix-hairpin-helix DNA-binding class 1. (192 aa)    
Predicted Functional Partners:
ADL48377.1
KEGG: stp:Strop_3468 ComEC/Rec2-related protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
 
  
 0.942
ADL48432.1
PFAM: GCN5-related N-acetyltransferase; KEGG: saq:Sare_3887 hypothetical protein.
 
    0.783
ADL48376.1
KEGG: saq:Sare_3846 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta.
     
 0.723
ADL49494.1
KEGG: fre:Franean1_2610 hypothetical protein.
  
  
 0.634
ADL48375.1
KEGG: saq:Sare_3845 hypothetical protein.
       0.629
ADL49705.1
KEGG: stp:Strop_4511 transcription attenuator LytR; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
 
     0.618
ADL44744.1
KEGG: stp:Strop_4510 transcription attenuator LytR; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
 
     0.568
ADL43831.1
PFAM: peptidase A24A prepilin type IV; KEGG: stp:Strop_4462 peptidase A24A, prepilin type IV.
   
  
 0.552
ADL49567.1
PFAM: peptidase A24A prepilin type IV; KEGG: sco:SCO4549 type IV peptidase.
   
  
 0.552
ADL49738.1
KEGG: saq:Sare_5009 peptidase A24A prepilin type IV.
   
  
 0.552
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.