STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48391.1KEGG: gob:Gobs_1322 hypothetical protein. (261 aa)    
Predicted Functional Partners:
ADL48389.1
PFAM: Protein of unknown function DUF3618; KEGG: gob:Gobs_1320 hypothetical protein.
 
     0.941
ADL48390.1
KEGG: art:Arth_0347 hypothetical protein.
 
     0.940
ADL48467.1
KEGG: stp:Strop_3545 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
  
 0.701
ADL48973.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: saq:Sare_4259 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.693
ADL48974.1
KEGG: saq:Sare_4260 nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
  
 
 0.693
ADL48392.1
KEGG: saq:Sare_3857 hypothetical protein.
 
     0.666
ADL49146.1
PFAM: Uroporphyrinogen III synthase HEM4; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: saq:Sare_0428 uroporphyrinogen III synthase HEM4.
  
  
 0.631
ADL45610.1
KEGG: kra:Krad_0814 hypothetical protein.
  
     0.624
ADL47487.1
KEGG: saq:Sare_3139 nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit.
  
  
 0.517
ADL49292.1
KEGG: stp:Strop_0239 hypothetical protein.
  
     0.494
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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