STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48411.1KEGG: stp:Strop_3491 hypothetical protein. (201 aa)    
Predicted Functional Partners:
ADL48412.1
KEGG: stp:Strop_3492 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; Belongs to the folylpolyglutamate synthase family.
  
  
 0.932
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
 
   
 0.789
ADL48931.1
KEGG: stp:Strop_3838 hypothetical protein.
  
     0.726
ADL48047.1
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.679
ADL46712.1
KEGG: saq:Sare_2480 hypothetical protein.
  
     0.621
ADL48462.1
KEGG: stp:Strop_3540 hypothetical protein.
  
     0.619
ADL48534.1
KEGG: saq:Sare_3956 hypothetical protein.
  
     0.601
ADL43990.1
KEGG: saq:Sare_4438 hypothetical protein.
  
     0.589
ADL45142.1
KEGG: saq:Sare_1434 hypothetical protein.
  
     0.577
ADL48909.1
TIGRFAM: chorismate mutase; PFAM: Chorismate mutase, type II; KEGG: saq:Sare_4208 chorismate mutase; SMART: Chorismate mutase.
  
     0.562
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.