STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48458.1PFAM: MscS Mechanosensitive ion channel; KEGG: saq:Sare_3911 MscS mechanosensitive ion channel. (357 aa)    
Predicted Functional Partners:
ADL48457.1
KEGG: stp:Strop_3535 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease.
       0.547
mscL
Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
     
 0.533
ADL48460.1
Globin; KEGG: stp:Strop_3538 globin; manually curated; PFAM: globin.
       0.529
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.517
ADL48931.1
KEGG: stp:Strop_3838 hypothetical protein.
  
   
 0.454
ADL48459.1
PFAM: major facilitator superfamily MFS_1; KEGG: saq:Sare_3912 major facilitator transporter.
     
 0.443
ADL45781.1
PFAM: MscS Mechanosensitive ion channel; KEGG: saq:Sare_1758 MscS mechanosensitive ion channel.
      
 0.408
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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