STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48459.1PFAM: major facilitator superfamily MFS_1; KEGG: saq:Sare_3912 major facilitator transporter. (453 aa)    
Predicted Functional Partners:
ADL48460.1
Globin; KEGG: stp:Strop_3538 globin; manually curated; PFAM: globin.
       0.709
ADL47978.1
KEGG: gob:Gobs_3253 hypothetical protein.
  
     0.528
ADL48797.1
PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_3741 major facilitator transporter.
  
     0.458
ADL48458.1
PFAM: MscS Mechanosensitive ion channel; KEGG: saq:Sare_3911 MscS mechanosensitive ion channel.
     
 0.443
ADL48432.1
PFAM: GCN5-related N-acetyltransferase; KEGG: saq:Sare_3887 hypothetical protein.
   
    0.434
ADL43947.1
KEGG: stp:Strop_4074 hypothetical protein.
  
   
 0.412
ADL43989.1
KEGG: saq:Sare_4439 hypothetical protein.
  
     0.401
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.