STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48479.1KEGG: stp:Strop_3553 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein. (133 aa)    
Predicted Functional Partners:
ADL46417.1
PFAM: cysteine dioxygenase type I; KEGG: sna:Snas_1688 cysteine dioxygenase type I.
    0.691
ADL48478.1
KEGG: stp:Strop_3552 hypothetical protein.
       0.576
ADL48477.1
PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: saq:Sare_3926 hypothetical protein.
       0.527
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.503
ADL43914.1
PFAM: Terpene synthase metal-binding domain-containing protein; KEGG: rxy:Rxyl_0493 terpene synthase, metal-binding protein.
  
     0.449
ADL48476.1
KEGG: stp:Strop_3550 hypothetical protein.
       0.445
ADL44599.1
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: kfl:Kfla_4578 glycerophosphoryl diester phosphodiesterase.
 
    0.424
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.423
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.