STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48552.1KEGG: saq:Sare_3970 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI. (356 aa)    
Predicted Functional Partners:
ADL47930.1
KEGG: saq:Sare_3392 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
    
 
 0.734
ADL48553.1
Manually curated; PFAM: alpha amylase catalytic region; KEGG: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
  
  
 0.652
ADL48550.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saq:Sare_3968 binding-protein-dependent transport systems inner membrane component.
       0.617
ADL48551.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saq:Sare_3969 binding-protein-dependent transport systems inner membrane component.
       0.617
ADL46159.1
PFAM: condensation domain protein; KEGG: xal:XALc_1056 probable non-ribosomal peptide synthetase protein.
    
 
 0.575
ADL48549.1
PFAM: extracellular solute-binding protein family 1; KEGG: saq:Sare_3967 extracellular solute-binding protein.
       0.468
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.