STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48599.1Protein of unknown function DUF323; KEGG: sro:Sros_3062 non-specific serine/threonine protein kinase; manually curated; PFAM: protein of unknown function DUF323. (320 aa)    
Predicted Functional Partners:
ADL48589.1
PFAM: sulfatase; KEGG: sus:Acid_4852 sulfatase.
 
   0.907
ADL48598.1
KEGG: tfu:Tfu_0615 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase.
       0.773
egtD
Methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
 
  
 0.750
egtA
Glutamate/cysteine ligase family protein; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low- molecular thiol compound ergothioneine.
  
  
 0.568
ADL48600.1
PFAM: extracellular solute-binding protein family 5; KEGG: kse:Ksed_26350 ABC-type dipeptide transport system, periplasmic component.
       0.507
ADL48595.1
PFAM: Aldehyde Dehydrogenase; KEGG: kfl:Kfla_4654 aldehyde dehydrogenase.
     
 0.506
ADL48597.1
Regulatory protein GntR HTH; KEGG: rop:ROP_33420 putative GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH.
       0.503
ADL48596.1
KEGG: nml:Namu_2318 peptidase M20; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerization domain protein.
       0.497
ADL48590.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR.
       0.461
ADL48591.1
KEGG: kfl:Kfla_4655 ABC transporter related protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.461
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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